miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|167022844|gb|CU396458.1|CU396458 CGGCCGGGGTGAAGAGTTGAGAGCAGCTGCTGCCACGCAGTTCGGTTCTGGCTGGGCTTGGCTTGCTTTTAATCCCCGTC
CATCAGATGGGAAGGAGCTTCTAGTAGTGAGGAGTCCCAATGCTGTGAATCCCCTGGTTCTGGGCTACATACCACTCCTC
ACGATTGACGTATGGGAGCATGCTTACTACCTTGACTATCAGAACCGACGGCCTGATTACATATCAATCTTCATGGAGAA
GCTCGTTTCCTGGGATGCAGTTAGCGCTAAGCTTGAGGTTGCCAAGGCTCAAGCTGCTTAAAACGAGACGAGGAAGAAGA
GAGAAGGGGTGGTACTGATTCTAGTTATACATCTCTGCTGAAGATGTTCAGAAGCTCGAGATTTTCATCATCATCATCTT
CTTGTTTTTTGCCCGAAATGGTCCCATAATAACGGACCCGTTCCCTATTCTCTCTTAGAGGACGCAGGGGGGAGACTGGA
CCGAAACTTGCTTTCCCTTCTTTGTTGTCGTGAGAAATATCCCATATTTTGCGCTGAATCTATGAGGTGGGATTGCTTGT
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGTCGGCCG




Most similar to sp|P22302|SODF_NICPL

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P22302|SODF_NICPL Superoxide dismutase [Fe], chloroplastic
           SV=1
          Length = 202

 Score =  147 bits (370), Expect = 6e-35
 Identities = 69/93 (74%), Positives = 82/93 (88%)
 Frame = +2

Query: 11  EELRAAAATQFGSGWAWLAFNPRPSDGKELLVVRSPNAVNPLVLGYIPLLTIDVWEHAYY 190
           +E +AAAATQFGSGWAWLA+ P   + K+L +V++PNA NPLVLGY PLLTIDVWEHAYY
Sbjct: 113 KEFKAAAATQFGSGWAWLAYKP---EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYY 169

Query: 191 LDYQNRRPDYISIFMEKLVSWDAVSAKLEVAKA 289
           LD+QNRRPDYISIFMEKLVSW+AVS++L+ A A
Sbjct: 170 LDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202